Publikacje - Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

HONG Y., MACKENZIE E.S., FIRTH S.J., BOLTON J.R.F., STEWART L.J., WALDRON K.J., DJOKO K.Y., Mis-regulation of Zn and Mn homeostasis is a key phenotype of Cu stress in Streptococcus pyogenes. Metallomics (2023) 15(11): mfad064 (12 p.) DOI: 10.1093/mtomcs/mfad064 IF 3.4 (2022)

BAJER A., ALSARRAF M., TOPOLNYTSKA M., TOŁKACZ K., DWUŻNIK-SZAREK D., RODO A., Vector-borne parasites in dogs from Ukraine translocated to Poland following Russian invasion in 2022. Parasites & Vectors (2023) 16(1): 430 (7 p.) DOI: 10.1186/s13071-023-06042-2 IF 3.2 (2022)

SCHINDLER D., WALKER R.S.K., JIANG S., BROOKS A.N., WANG Y., MÜLLER C.A., COCKRAM CH., LUO Y., GARCIA A., SCHRAIVOGEL D., MOZZICONACCI J., PENA N., ASSARI M., SÁNCHEZ OLMOS MDC., ZHAO Y., BALLERINI A., BLOUNT B.A., CAI J., OGUNLANA L., LIU W., JÖNSSON K., ABRAMCZYK D., GARCIA-RUIZ E., TUROWSKI T.W., SWIDAH R., ELLIS T., PAN T., ANTEQUERA F., SHEN Y., NIEDUSZYNSKI C.A., KOSZUL R., DAI J., STEINMETZ L.M., BOEKE J.D., CAI Y., Design, construction, and functional characterization of a tRNA neochromosome in yeast. Cell (2023) 186(24): 5237-5253.e22 DOI: 10.1016/j.cell.2023.10.015 IF 64.5 (2022)

MORCINEK-ORŁOWSKA J., WALTER B., FORQUET R., CYSEWSKI D., CARLIER M., MOZOLEWSKI M., MEYER S., GLINKOWSKA M., Interaction networks of Escherichia coli replication proteins under different bacterial growth conditions. Scientific Data (2023) 10(1): 788 (15 p.) DOI: 10.1038/s41597-023-02710-1 IF 9.8 (2022)

GUTKOWSKA M., BUSZEWICZ D., ZAJBT-ŁUCZNIEWSKA M., RADKIEWICZ M., NOWAKOWSKA J., ŚWIEŻEWSKA E., SURMACZ L., Medium-chain-length polyprenol (C45-C55) formation in chloroplasts of Arabidopsis is brassinosteroid-dependent. Journal of Plant Physiology (2023) 291: 154126 (10 p.) DOI: 10.1016/j.jplph.2023.154126 IF 4.3 (2022)

ZAKRZEWSKA-PŁACZEK M., GOLISZ-MOCYDLARZ A., KRZYSZTOŃ M., PIOTROWSKA J., LICHOCKA M., KUFEL J., The nucleolar protein NOL12 is required for processing of large ribosomal subunit rRNA precursors in Arabidopsis. BMC Plant Biology (2023) 23(1): 538 (16 p.) DOI: 10.1186/s12870-023-04561-9 IF 5.3 (2022)

TOMECKI R., DRĄŻKOWSKA K., KOBYŁECKI K., TUDEK A., SKI complex: A multifaceted cytoplasmic RNA exosome cofactor in mRNA metabolism with links to disease, developmental processes, and antiviral responses. Wiley Interdisciplinary Reviews-RNA (2023) 14(6): e1795 (69 p.) DOI: 10.1002/wrna.1795 IF 7.3 (2022)

RUDZKA A., PATLOKA O., PŁECHA M., KRÓLIKOWSKI T., OCZKOWSKI M., ZBOROWSKI M., KOŁOŻYN-KRAJEWSKA D., ZIELIŃSKA D., Changes in the microbiome of a human and in the Simulator of Human Intestinal Microbial Ecosystem (SHIME®) in response to a diet and probiotic supplementation. Żywność. Nauka. Technologia. Jakość (2023) 30(1): 53-72 DOI: 10.15193/zntj/2023/134/437 IF - (2022)

SOKOŁOWSKA B., ORŁOWSKA M., OKRASIŃSKA A., PIŁSYK S., PAWŁOWSKA J., MUSZEWSKA A., What can be lost? Genomic perspective on the lipid metabolism of Mucoromycota. IMA Fungus (2023) 14(1): 22 (21 p.) DOI: 10.1186/s43008-023-00127-4 IF 5.4 (2022)

YANG X-C., DESOTELL A., LIN M-H., PAIGE A.S., MALINOWSKA A., SUN Y., AIK W.S., DADLEZ M., TONG L., DOMIŃSKI Z., In vitro methylation of the U7 snRNP subunits Lsm11 and SmE by the PRMT5/MEP50/pICln methylosome. RNA (2023) 29(11): 1673-1690 DOI: 10.1261/rna.079709.123 IF 4.5 (2022)

SZCZĘŚNIAK K., VEILLARD F., SCAVENIUS C., CHUDZIK K., FERENC K., BOCHTLER M., POTEMPA J., MIZGALSKA D., The Bacteroidetes Q-rule and glutaminyl cyclase activity increase the stability of extracytoplasmic proteins. mBio (2023) 14(5): e0098023 (16 p.) DOI: 10.1128/mbio.00980-23 IF 6.4 (2022)

CUKIER S., RĄCZKA R., KAMASZEWSKI M., Large branchiopods in extensive carp ponds - morphometric analysis of Triops cancriformis (Bosc, 1801) and Streptocephalus torvicornis (Waga, 1842). Oceanological and Hydrobiological Studies (2023) 52(3): 374-388 DOI: 10.26881/oahs-2023.3.10 IF 0.9 (2022)

OSTROWSKI G., JAWORSKA D., PŁECHA M., PRZYBYLSKI W., SAŁEK P., SAWICKI K., PAWŁOWSKA J., Cold adapted and closely related mucoraceae species colonise dry-aged beef (DAB). Fungal Biology (2023) 127(10-11): 1397-1404 DOI: 10.1016/j.funbio.2023.09.005 IF 2.5 (2022)

TOMASOVA L., MAKSYMIUK K., CHABOWSKI D., SAMBOROWSKA E., UFNAL M., Mice, Rats and Guinea Pigs Exhibit Significant Variations in the Plasma, Urine and Tissue Levels of Taurine, Betaine, Sarcosine and Other Osmolyte-Active Amino Acids. Discovery Medicine (2023) 35(177): 492-502 DOI: 10.24976/Discov.Med.202335177.50 IF 1.4 (2022)

ENKHBAATAR T., SKONECZNY M., STĘPIEŃ K., MOŁOŃ M., SKONECZNA A., Live while the DNA lasts. The role of autophagy in DNA loss and survival of diploid yeast cells during chronological aging. Aging-US (2023) 15(19): 9967-9992 DOI: 10.18632/aging.205102 IF 5.2 (2022)

KAUSHAL V., KLIM J., SKONECZNA A., KURLANDZKA A., ENKHBAATAR T., KACZANOWSKI S., ZIELENKIEWICZ U., Apoptotic Factors Are Evolutionarily Conserved Since Mitochondrial Domestication. Genome Biology and Evolution (2023) 15(10): evad154 (14 p.) DOI: 10.1093/gbe/evad154 IF 3.3 (2022)

JELEŃ M., GROCHOWINA I., GRABIŃSKA-ROGALA A., CIESIELSKI SZ. J., DĄBROWSKA K., TOMICZEK B., NIERZWICKI Ł., DELEWSKI W., SCHILKE B., CZUB J., DADLEZ M., DUTKIEWICZ R., CRAIG E.A., MARSZAŁEK J., Analysis of Reconstituted Tripartite Complex Supports Avidity-based Recruitment of Hsp70 by Substrate Bound J-domain Protein. Journal of Molecular Biology (2023) 435(21): 168283 (15 p.) DOI: 10.1016/j.jmb.2023.168283 IF 5.6 (2022)

MARKS R., PAWŁOWSKI P.H., Rotational-electric principles of RNA/DNA and viability. AIMS Biophysics (2023) 10(3): 385-400 DOI: 10.3934/biophy.2023023 IF 1.5 (2022)

RAKHMETULLINA A., IVASHCHENKO A., PYRKOVA A., UTEULIN K., ZIELENKIEWICZ P., In silico analysis of maize and wheat miRNAs as potential regulators of human gene expression. ExRNA (2023) 5:4 (15 p.) DOI: 10.21037/exrna-23-4 IF - (2022)

GOROSPE C.M., CARVALHO G., HERRERA CURBELO A., MARCHHART L., MENDES I.C., NIEDŹWIECKA K., WANROOIJ P.H., Mitochondrial membrane potential acts as a retrograde signal to regulate cell cycle progression. Life Science Alliance (2023) 6(12): e202302091 (14 p.) DOI: 10.26508/lsa.202302091 IF 4.4 (2022)

PUZIA W., GAWOR J., GROMADKA R., ŻUCHNIEWICZ K., WRÓBEL-PAWELCZYK I., RONKIEWICZ P., GOŁĘBIEWSKA A., HRYNIEWICZ W., SADOWY E., SKOCZYŃSKA A., Highly Resistant Serotype 19A Streptococcus pneumoniae of the GPSC1/CC320 Clone from Invasive Infections in Poland Prior to Antipneumococcal Vaccination of Children. Infectious Diseases and Therapy (2023) 12(8): 2017-2037 DOI: 10.1007/s40121-023-00842-w IF 5.4 (2022)

GRZESIAK J., GAWOR J., ROGALA M.M., KOUŘILOVÁ X., OBRUČA S., Genetic engineering of low-temperature polyhydroxyalkanoate production by Acidovorax sp. A1169, a psychrophile isolated from a subglacial outflow. Extremophiles (2023) 27: 25 (14 p.) DOI: 10.1007/s00792-023-01311-5 IF 2.9 (2022)

PARK S., KIM M., LIN Y., HONG M., NAM G., MIECZKOWSKI A., KARDOS J., LEE Y-H., LIM M.H., Designing multi-target-directed flavonoids: a strategic approach to Alzheimer's disease. Chemical Science (2023) 14: 9293 (13 p.) DOI: 10.1039/d3sc00752a IF 8.4 (2022)

TAHMAZ I., SHAHMORADI GHAHE S., STASIAK M., LIPUT K.P., JONAK K., TOPF U., Prefoldin 2 contributes to mitochondrial morphology and function. BMC Biology (2023) 21: 193 (27 p.) DOI: 10.1186/s12915-023-01695-y IF 5.4 (2022)

PŁONKA D., WIŚNIEWSKA M.D., ZIEMSKA-LEGIĘCKA J., GRYNBERG M., BAL W., The Cu(II) affinity constant and reactivity of Hepcidin-25, the main iron regulator in human blood. Journal of Inorganic Biochemistry (2023) 248: 112364 (11 p.) DOI: 10.1016/j.jinorgbio.2023.112364 IF 3.9 (2022)

KUJAWA M.J., ŚWIĘTOŃ D., WIERZBA J., GRZYWIŃSKA M., BUDZIŁO O., LIMANÓWKA M., PIERZYNOWSKA K., GAFFKE L., GRABOWSKI Ł., CYSKE Z., RINTZ E., RĄBALSKI Ł., KOSIŃSKI M., WĘGRZYN G., MAŃSKI A., ANIKIEJ-WICZENBACH P., RANGANATH L., PISKUNOWICZ M., Clinical presentation of 13 children with alkaptonuria. Journal of Inherited Metabolic Disease (2023) 46(5): 916-930 DOI: 10.1002/jimd.12647 IF 4.2 (2022)

ORŁOWSKA M., BARUA D., PIŁSYK S., MUSZEWSKA A., Fucose as a nutrient ligand for Dikarya and a building block of early diverging lineages. IMA Fungus (2023) 14: 17 (17 p.) DOI: 10.1186/s43008-023-00123-8 IF 5.4 (2022)

TOŁKACZ K., KRETSCHMER M., NOWAK S., MYSŁAJEK R.W., ALSARRAF M., WĘŻYK D., BAJER A., The first report on Hepatozoon canis in dogs and wolves in Poland: clinical and epidemiological features. Parasites & Vectors (2023) 16: 313 (11 p.) DOI: 10.1186/s13071-023-05928-5 IF 3.2 (2022)

JAGIELSKA M., HAŁAKUC P., PŁECHA M., MILANOWSKI R., Genomy mitochondrialne – jedność i różnorodność. Postępy Biochemii (2023) 69(2): 113-121 DOI: 10.18388/pb.2021_486 IF - (2022)

FUDALA K., BIALIK R.J., Identifying Important Bird and Biodiversity Areas in Antarctica Using RPAS Surveys—A Case Study of Cape Melville, King George Island, Antarctica. Drones (2023) 7(8): 538 (11 p.) DOI: 10.3390/drones7080538 IF 4.8 (2022)

NAZARUK P., TKACZYK I., MONTICOLO M., JĘDRZEJCZAK A.M., KRATA N., PĄCZEK L., FORONCEWICZ B., MUCHA K., Hybrid Immunity Provides the Best COVID-19 Humoral Response in Immunocompromised Patients with or without SARS-CoV-2 Infection History. Vaccines (2023) 11(8): 1380 (18 p.) DOI: 10.3390/vaccines11081380 IF 7.8 (2022)

ŻURAWSKA M., BASIK M., AGUILAR-MAHECHA A., DADLEZ M., DOMAŃSKI D., A micro-flow, high-pH, reversed-phase peptide fractionation and collection system for targeted and in-depth proteomics of low-abundance proteins in limiting samples. MethodsX (2023) 11: 102306 (11 p.) DOI: 10.1016/j.mex.2023.102306 IF 1.9 (2022)

POPŁAWSKI P., ZARYCHTA-WIŚNIEWSKA W., BURDZIŃSKA A., BOGUSŁAWSKA J., ADAMIOK-OSTROWSKA A., HANUSEK K., RYBICKA B., BIAŁAS A., KOSSOWSKA H., IWANICKA-NOWICKA R., KOBLOWSKA M., PĄCZEK L., PIEKIEŁKO-WITKOWSKA A. Renal cancer secretome induces migration of mesenchymal stromal cells. Stem Cell Research & Therapy (2023) 14(1): 200 (13 p.) DOI: 10.1186/s13287-023-03430-4 IF 7.5 (2022)

MIERZEJEWSKI B., GRABOWSKA I., MICHALSKA Z., ZDUŃCZYK K., ZARĘBA F., IRHASHAVA A., CHRZĄSZCZ M., PATRYCY M., STREMIŃSKA W., JAŃCZYK-ILACH K., KOBLOWSKA M., IWANICKA-NOWICKA R., GROMADKA A., KOWALSKI K., CIEMERYCH M.A., BRZÓSKA E., SDF-1 and NOTCH signaling in myogenic cell differentiation: the role of miRNA10a, 425, and 5100. Stem Cell Research & Therapy (2023) 14(1): 204 (26 p.) DOI: 10.1186/s13287-023-03429-x IF 7.5 (2022)

KARSKA N., ZHUKOV I., LIPIŃSKA A.D., RODZIEWICZ-MOTOWIDŁO S., KRUPA P., Why does the herpes simplex 1 virus-encoded UL49.5 protein fail to inhibit the TAP-dependent antigen presentation? Biochimica et Biophysica Acta-Biomembranes (2023) 1865(8): 184200 (12 p.) DOI: 10.1016/j.bbamem.2023.184200 IF 3.4 (2022)

RACHOWKA J., ANIELSKA-MAZUR A., BUCHOLC M., STEPHENSON K., KULIK A., SnRK2.10 kinase differentially modulates expression of hub WRKY transcription factors genes under salinity and oxidative stress in Arabidopsis thaliana. Frontiers in Plant Science (2023) 14: 1135240 (21 p.) DOI: 10.3389/fpls.2023.1135240 IF 5.6 (2022)

GRYGANSKYI A.P., GOLAN J., MUSZEWSKA A., IDNURM A., DOLATABADI S., MONDO S.J., KUTOVENKO V.B., KUTOVENKO V.O., GAJDECZKA M.T., ANISHCHENKO I.M., PAWŁOWSKA J., TRAN N.V., EBERSBERGER I., VOIGT K., WANG Y., CHANG Y., PAWLOWSKA T.E., HEITMAN J., VILGALYS R., BONITO G., BENNY G.L., SMITH M.E., REYNOLDS N., JAMES T.Y., GRIGORIEV I.V., SPATAFORA J.W., STAJICH J.E., Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned? Microorganisms (2023) 11(7): 1830 (24 p.) DOI: 10.3390/microorganisms11071830 IF 4.5 (2022)

BARANOWSKI B., PAWŁOWSKI K., Protein family neighborhood analyzer- ProFaNA. PeerJ (2023) 11: e15715 (24 p.) DOI: 10.7717/peerj.15715 IF 2.7 (2022)

PLENZLER J., PIOTROWICZ K., RYMER W., BUDZIK T., Variability of biothermal conditions in the vicinity of the Polish Antarctic station in the South Shetlands, West Antarctica. Polar Research (2023) 42: 9108 (12 p.) DOI: 10.33265/polar.v42.9108 IF 1.9 (2022)

KAWAŁEK A., BARTOSIK A.A., JAGURA-BURDZY G., Robust ParB Binding to Half-parS Sites in Pseudomonas aeruginosa-A Mechanism for Retaining ParB on the Nucleoid? International Journal of Molecular Sciences (2023) 24(15): 12517 (17 p.) DOI: 10.3390/ijms241512517 IF 5.6 (2022)

OLEK R.A., SAMBOROWSKA E., WIŚNIEWSKI P., WOJTKIEWICZ P., WOCHNA K., ZIELIŃSKI J., Effect of a 3-month L-carnitine supplementation and resistance training program on circulating markers and bone mineral density in postmenopausal women: a randomized controlled trial. Nutrition & Metabolism (2023) 20(1): 32 (8 p.) DOI: 10.1186/s12986-023-00752-1 IF 4.5 (2022)

ENKLER L., SZENTGYÖRGYI V., PENNAUER M., PRESCIANOTTO-BASCHONG C., RIEZMAN I., WIĘSYK A., AVRAHAM R.E., SPIESS M., ZALCKVAR E., KUCHARCZYK R., RIEZMAN H., SPANG A., Arf1 coordinates fatty acid metabolism and mitochondrial homeostasis. Nature Cell Biology (2023) 25(8): 1157–1172 DOI: 10.1038/s41556-023-01180-2 IF 21.3 (2022)

MIERZEJEWSKA J., KOWALSKA P., MARLICKA K., DWORAKOWSKA S., SITKIEWICZ E., TRZASKOWSKI M., GŁUCHOWSKA A., MOSIENIAK G., MILNER-KRAWCZYK M., Exploring Extracellular Vesicles of Probiotic Yeast as Carriers of Biologically Active Molecules Transferred to Human Intestinal Cells. International Journal of Molecular Sciences (2023) 24(14): 11340 (15 p.) DOI: 10.3390/ijms241411340 IF 5.6 (2022)

LESZCZYŃSKA K., ŚWIĘCICKA I., DANILUK T., LEBENSZTEJN D., CHMIELEWSKA-DEPTUŁA S., LESZCZYŃSKA D., GAWOR J., KLIBER M., Escherichia albertii as a Potential Enteropathogen in the Light of Epidemiological and Genomic Studies. Genes (2023) 14(7): 1384 (19 p.) DOI: 10.3390/genes14071384 IF 3.5 (2022)

BOREK S., STEFANIAK SZ., NUC K., WOJTYŁA Ł., RATAJCZAK E., SITKIEWICZ E., MALINOWSKA A., ŚWIDERSKA B., WLEKLIK K., PIETROWSKA-BOREK M., Sugar Starvation Disrupts Lipid Breakdown by Inducing Autophagy in Embryonic Axes of Lupin (Lupinus spp.) Germinating Seeds. International Journal of Molecular Sciences (2023) 24(14): 11773 (31 p.) DOI: 10.3390/ijms241411773 IF 5.6 (2022)

FANTUZZI A., HANIEWICZ P., FARCI D., LOI M.C., PARK K., BÜCHEL C., BOCHTLER M., RUTHERFORD A.W., PIANO D., Bicarbonate activation of the monomeric photosystem II-PsbS/Psb27 complex. Plant Physiology (2023) 192(4): 2656-2671 DOI: 10.1093/plphys/kiad275 IF 7.4 (2022)

GREGORCZYK P., PORĘBSKA N., ŻUKOWSKA D., CHORĄŻEWSKA A., GĘDAJ A., MALINOWSKA A., OTLEWSKI J., ZAKRZEWSKA M., OPALIŃSKI Ł., N-glycosylation acts as a switch for FGFR1 trafficking between the plasma membrane and nuclear envelope. Cell Communication and Signaling (2023) 21(1): 177 (15 p.) DOI: 10.1186/s12964-023-01203-3 IF 8.4 (2022)

SARNOWSKA E., KUBALA S., ĆWIEK P., SACHAROWSKI S., OKSIŃSKA P., STECIUK J., ZABOROWSKA M., SZURMAK J., DUBIAŃSKI R., MAASSEN A., STACHOWIAK M., HUETTEL B., CIEŚLA M., NOWICKA K., ROLICKA A.T., ALSEEKH S., BUCIOR E., FRANZEN R., SKONECZNA A., DOMAGALSKA M.A., AMAR S., HAJIREZAEI M-R., SIEDLECKI J.A., FERNIE A.R., DAVIS S.J., SARNOWSKI T.J., A non-canonical function of Arabidopsis ERECTA proteins and a role of the SWI3B subunit of the SWI/SNF chromatin remodeling complex in gibberellin signaling. The Plant Journal (2023) 115(3): 788-802 DOI: 10.1111/tpj.16261 IF 7.2 (2022)

HARNAGEL A.P., SHESHOVA M., ZHENG M., ZHENG M., SKORUPIŃSKA-TUDEK K., ŚWIEŻEWSKA E., LUPOLI T.J., Preference of Bacterial Rhamnosyltransferases for 6-Deoxysugars Reveals a Strategy To Deplete O-Antigens. Journal of the American Chemical Society (2023) 145(29): 15639−15646 DOI: 10.1021/jacs.3c03005 IF 15.0 (2022)

BOROWSKI Ł.S., KASZTELAN K., CZERWIŃSKA-KOSTRZEWSKA J., SZCZĘSNY R.J., High-Throughput Image-Based Quantification of Mitochondrial DNA Synthesis and Distribution. Jove-Journal of Visualized Experiments (2023) 195: e65236 (13 p.) DOI: 10.3791/65236 IF 1.2 (2022)