Publikacje - Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

BARCZAK-BRZYŻEK A., BRZYŻEK G., KOTER M., SIEDLECKA E., GAWROŃSKI P., FILIPECKI M., Plastid retrograde regulation of miRNA expression in response to light stress. BMC Plant Biology (2022) 22(1): 150 (15 p.) DOI: 10.1186/s12870-022-03525-9 IF 5.260 (2021)

GRABOWSKI Ł., GAFFKE L., PIERZYNOWSKA K., CYSKE Z., CHOSZCZ M., WĘGRZYN G., WĘGRZYN A., Enrofloxacin—The Ruthless Killer of Eukaryotic Cells or the Last Hope in the Fight against Bacterial Infections? International Journal of Molecular Sciences (2022) 23(7): 3648 (22 p.) DOI: 10.3390/ijms23073648 IF 6.208 (2021)

OWSIAN D., GRUCHOTA J., ARNAIZ O., NOWAK J.K., The transient Spt4-Spt5 complex as an upstream regulator of non-coding RNAs during development. Nucleic Acids Research (2022) 50(5): 2603-2620 DOI: 10.1093/nar/gkac106 IF 19.160 (2021)

SZCZEPANEK-PARULSKA E., BUDNY B., BOROWCZYK M., ZHUKOV I., SZUTKOWSKI K., ZAWADZKA K., TAHIR R., MINCZYKOWSKI A., NIEDZIELA M., RUCHAŁA M., NKX2-5 Variant in Two Siblings with Thyroid Hemiagenesis. International Journal of Molecular Sciences (2022) 23(6): 3414 (10 p.) DOI: 10.3390/ijms23063414 IF 6.208 (2021)

STĘPIEŃ K., SKONECZNA A., KULA-MAXIMENKO M., JURCZYK Ł., MOŁOŃ M., Depletion of the Origin Recognition Complex Subunits Delays Aging in Budding Yeast. Cells (2022) 11(8): 1252 (43 p.) DOI: 10.3390/cells11081252 IF 7.666 (2021)

MORCINEK-ORŁOWSKA J., ZDROJEWSKA K., WĘGRZYN A., Bacteriophage-Encoded DNA Polymerases-Beyond the Traditional View of Polymerase Activities. International Journal of Molecular Sciences (2022) 23(2): 635 (17 p.) DOI: 10.3390/ijms23020635 IF 6.208 (2021)

OPPERT B., MUSZEWSKA A., STECZKIEWICZ K., ET AL. The Genome of Rhyzopertha dominica (Fab.) (Coleoptera: Bostrichidae): Adaptation for Success. Genes (2022) 13(3): 446 (43 p.) DOI: 10.3390/genes13030446 IF 4.141 (2021)

KASAREŁŁO K., KÖHLING I., KOSOWSKA A., PUCIA K., ŁUKASIK A., CUDNOCH-JĘDRZEJEWSKA A., PĄCZEK L., ZIELENKIEWICZ U., ZIELENKIEWICZ P., The Anti-Inflammatory Effect of Cabbage Leaves Explained by the Influence of bol-miRNA172a on FAN Expression. Frontiers in Pharmacology (2022) 13: 846830 (8 p.) DOI: 10.3389/fphar.2022.846830 IF 5.988 (2021)

BOGUTA M., Assembly of RNA polymerase III complex involves a putative co-translational mechanism. Gene (2022) 824: 146394 (5 p.) DOI: 10.1016/j.gene.2022.146394 IF 3.913 (2021)

WIŃSKA P., WIDŁO Ł., SENKARA E., KORONKIEWICZ M., CIEŚLA J.M., KRZYŚKO A., SKIERKA K., CIEŚLA J., Inhibition of Protein Kinase CK2 Affects Thymidylate Synthesis Cycle Enzyme Level and Distribution in Human Cancer Cells. Frontiers in Molecular Biosciences (2022) 9: 847829 (13 p.) DOI: 10.3389/fmolb.2022.847829 IF 6.113 (2021)

PAWŁOWSKI P.H., SARS-CoV-2 variant Omicron (B.1.1.529) is in a rising trend of mutations increasing the positive electric charge in crucial regions of the spike protein S. Acta Biochimica Polonica (2022) 69(1): 263–264 DOI: 10.18388/abp.2020_6072 IF 2.349 (2021)

MADILL-THOMSEN K.S., ABOULJOUD M., BHATI C., CISZEK M., DURLIK M., FENG S., FORONCEWICZ B., FRANCIS I., GRĄT M., JURCZYK K., KLINTMALM G., KRASNODĘBSKI M., MCCAUGHAN G., MIQUEL R., MONTANO-LOZA A., MOONKA D., MUCHA K., MYŚLAK M., PĄCZEK L., ET AL. The molecular phenotypes of injury, steatohepatitis, and fibrosis in liver transplant biopsies in the INTERLIVER study. American Journal of Transplantation (2022) 22(3): 909-926 DOI: 10.1111/ajt.16890 IF 9.369 (2021)

CHMIELEWSKA-JEZNACH M., STECZKIEWICZ K., KOBYŁECKI K., BARDOWSKI J.K., SZCZEPANKOWSKA A.K., An Adenosine Triphosphate- Dependent 5′-3′ DNA Helicase From sk1-Like Lactococcus lactis F13 Phage. Frontiers in Microbiology (2022) 13: 840219 (13 p.) DOI: 10.3389/fmicb.2022.840219 IF 6.064 (2021)

KABALA A.M., BIŃKO K., GODARD F., CHARLES C., DAUTANT A., BARANOWSKA E., SKOCZEŃ N., GOMBEAU K., BOUHIER M., BECKER H.D., ACKERMAN S.H., STEINMETZ L.M., TRIBOUILLARD-TANVIER D., KUCHARCZYK R., DI RAGO J.-P., Assembly-dependent translation of subunits 6 (Atp6) and 9 (Atp9) of ATP synthase in yeast mitochondria. Genetics (2022) 220(3): iyac007 (15 p.) DOI: 10.1093/genetics/iyac007 IF 4.402 (2021)

DOAN K., NIEDZIAŁKOWSKA M., STEFANIAK K., STANKOVIC A., ET AL. Phylogenetics and phylogeography of red deer mtDNA lineages during the last 50 000 years in Eurasia. Zoological Journal of the Linnean Society (2022) 194(2): 431-456 DOI: 10.1093/zoolinnean/zlab025 IF 3.834 (2021)

GIELNIK M., ZHUKOVA L., ZHUKOV I., GRÄSLUND A., KOZAK M., WÄRMLÄNDER S.K.T.S., The engineered peptide construct NCAM1-Aβ inhibits fibrillization of the human prion protein (PrP). Acta Biochimica Polonica (2022) 69(1): 257-261 DOI: 10.18388/abp.2020_5679 IF 2.349 (2021)

KLUSKA K., VERONESI G., DENIAUD A., HAJDU B., GYURCSIK B., BAL W., KRĘŻEL A., Structures of Silver Fingers and a Pathway to Their Genotoxicity. Angewandte Chemie International Edition (2022) 61(12): e202116621 (8 p.) DOI: 10.1002/anie.202116621 IF 16.823 (2021)

GAWRYŚ K., TUREK-JAKUBOWSKA A., GAWRYŚ J., JAKUBOWSKI M., DĘBSKI J., SZAHIDEWICZ-KRUPSKA E., TROCHA M., DERKACZ A., DOROSZKO A., Platelet-Derived Drug Targets and Biomarkers of Ischemic Stroke—The First Dynamic Human LC-MS Proteomic Study. Journal of Clinical Medicine (2022) 11(5): 1198 (15 p.) DOI: 10.3390/jcm11051198 IF 4.964 (2021)

ROBAK A., KISTOWSKI M., WOJTAS G., PERZANOWSKA A., TARGOWSKI T., MICHALAK A., KRASOWSKI G., DADLEZ M., DOMAŃSKI D., Diagnosing pleural effusions using mass spectrometry-based multiplexed targeted proteomics quantitating mid- to high-abundance markers of cancer, infection/inflammation and tuberculosis. Scientific Reports (2022) 12(1): 3054 (18 p.) DOI: 10.1038/s41598-022-06924-y IF 4.996 (2021)

KOWAL K., TKACZYK-WLIZŁO A., PIERZCHAŁA M., GAWOR J., ŚLASKA B., Molecular differences in mitochondrial DNA genomes of dogs with malignant mammary tumours. Veterinary and Comparative Oncology (2022) 20(1): 256-264 DOI: 10.1111/vco.12772 IF 2.385 (2021)

BACZEWSKA-DĄBROWSKA A.H., DMUCHOWSKI W., GOZDOWSKI D., GWOREK B., JÓŹWIAK A., ŚWIEŻEWSKA E., DĄBROWSKI P., SUWARA I., The importance of prenol lipids in mitigating salt stress in the leaves of Tilia × euchlora trees. Trees-Structure and Function (2022) 36(1): 393–404 DOI: 10.1007/s00468-021-02214-8 IF 2.888 (2021)

KULESZA A., ZIELNIOK K., HAWRYLUK J., PĄCZEK L., BURDZIŃSKA A., Ibuprofen in Therapeutic Concentrations Affects the Secretion of Human Bone Marrow Mesenchymal Stromal Cells, but Not Their Proliferative and Migratory Capacity. Biomolecules (2022) 12(2): 287 (19 p.) DOI: 10.3390/biom12020287 IF 6.064 (2021)

LIU CH., SKORUPIŃSKA-TUDEK K., ERIKSSON S-G., PARMRYD I., Potentiating Vγ9Vδ2 T cell proliferation and assessing their cytotoxicity towards adherent cancer cells at the single cell level. Biology Open (2022) 11(1): bio059049 (10 p.) DOI: 10.1242/bio.059049 IF 2.643 (2021)

SZYMAŃSKA A., MUCHA K., KOSIERADZKI M., NAZAREWSKI S., PĄCZEK L., FORONCEWICZ B., Organization of Post-Transplant Care and the 5-Year Outcomes of Kidney Transplantation. International Journal of Environmental Research and Public Health (2022) 19(4): 2010 (12 p.) DOI: 10.3390/ijerph19042010 IF 4.614 (2021)

VAN BEL M., SILVESTRI F., WEITZ E.M., KREFT Ł., BOTZKI A., COPPENS F., VANDEPOELE K., PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants. Nucleic Acids Research (2022) 50(D1): D1468-D1474 DOI: 10.1093/nar/gkab1024 IF 19.16 (2021)

KLOSKA A., CECH G.M., NOWICKI D., MACIĄG-DORSZYŃSKA M., BOGUCKA A.E., MARKERT S., BECHER D., POTRYKUS K., CZAPLEWSKA P., SZALEWSKA-PAŁASZ A., Three Microbial Musketeers of the Seas: Shewanella baltica, Aliivibrio fischeri and Vibrio harveyi, and Their Adaptation to Different Salinity Probed by a Proteomic Approach. International Journal of Molecular Sciences (2022) 23(2): 619 (29 p.) DOI: 10.3390/ijms23020619 IF 6.208 (2021)

KRZYSZTOŃ M., KUFEL J., Analysis of mRNA‑derived siRNAs in mutants of mRNA maturation and surveillance pathways in Arabidopsis thaliana. Scientific Reports (2022) 12(1): 1474 (13 p.) DOI: 10.1038/s41598-022-05574-4 IF 4.996 (2021)

KOSZNIK-KWAŚNICKA K., GOLEC P., JAROSZEWICZ W., LUBOMSKA D., PIECHOWICZ L., Into the Unknown: Microbial Communities in Caves, Their Role, and Potential Use. Microorganisms (2022) 10(2): 222 (18 p.) DOI: 10.3390/microorganisms10020222 IF 4.926 (2021)

BAJOR M., GRACZYK-JARZYNKA A., MARHELAVA K., BURDZIŃSKA A., MUCHOWICZ A., GORAL A., ZHYLKO A., SOROCZYŃSKA K., RETECKI K., KRAWCZYK M., KŁOPOTOWSKA M., PILCH Z., PĄCZEK L., MALMBERG K-J., WÄLCHLI S., WINIARSKA M., ZAGOŻDŻON R., PD-L1 CAR effector cells induce self-amplifying cytotoxic effects against target cells. Journal for Immunotherapy of Cancer (2022) 10(1): e002500 (14 p.) DOI: 10.1136/jitc-2021-002500 IF 12.469 (2021)

WĘSIERSKA M., KLOSKA A., MEDINA L.D., JAKÓBKIEWICZ-BANECKA J., GABIG-CIMIŃSKA M., RADZIŃSKA M., MOSKOT M., MALINOWSKA M., Cellular and Gene Expression Response to the Combination of Genistein and Kaempferol in the Treatment of Mucopolysaccharidosis Type I. International Journal of Molecular Sciences (2022) 23(3): 1058 (27 p.) DOI: 10.3390/ijms23031058 IF 6.208 (2021)

LICHOCKA M., KRZYMOWSKA M., GÓRECKA M., HENNIG J., Arabidopsis annexin 5 is involved in maintenance of pollen membrane integrity and permeability. Journal of Experimental Botany(2022) 73(1): 94–109 DOI: 10.1093/jxb/erab419 IF 7.298 (2021)

GAWARECKA K., SIWIŃSKA J., POZNAŃSKI J., ONYŚK A., SUROWIECKI P., SZTOMPKA K., SURMACZ L., AHN J.H., KORTE A., ŚWIEŻEWSKA E., IHNATOWICZ A., cis-prenyltransferase 3 and alpha/beta-hydrolase are new determinants of dolichol accumulation in Arabidopsis. Plant, Cell and Environment (2022) 45(2): 479-495 DOI: 10.1111/pce.14223 IF 7.947 (2021)

LITWINEK D., BORECZEK J., GAMBUŚ H., BUKSA K., BERSKI W., KOWALCZYK M., Developing lactic acid bacteria starter cultures for wholemeal rye flour bread with improved functionality, nutritional value, taste, appearance and safety. PLOS ONE (2022) 17(1): e0261677 (21 p.) DOI: 10.1371/journal.pone.0261677 IF 3.752 (2021)

TUREK-JAKUBOWSKA A., DĘBSKI J., JAKUBOWSKI M., SZAHIDEWICZ-KRUPSKA E., GAWRYŚ J., GAWRYŚ K., JANUS A., TROCHA M., DOROSZKO A., New Candidates for Biomarkers and Drug Targets of Ischemic Stroke-A First Dynamic LC-MS Human Serum Proteomic Study. Journal of Clinical Medicine (2022) 11(2): 339 (13 p.) DOI: 10.3390/jcm11020339 IF 4.964 (2021)

RUDZIŃSKA I., PŁONKA M., ARMATOWSKA A., TUROWSKI T., BOGUTA M., Rbs1 protein, involved in RNA polymerase III complex assembly in the yeast Saccharomyces cerevisiae, induces a Gcn4 response and forms aggregates when overproduced. Gene (2022) 809: 146034 (6 p.) DOI: 10.1016/j.gene.2021.146034 IF 3.913 (2021)

CALVO J.S., VILLONES R.L.E., YORK N.J., STEFANIAK E., HAMILTON G.E., STELLING A.L., BAL W., PIERCE B.S., MELONI G., Evidence for a Long-Lived, Cu-Coupled and Oxygen-Inert Disulfide Radical Anion in the Assembly of Metallothionein-3 Cu(I)₄-Thiolate Cluster. Journal of the American Chemical Society (2022) 144(2): 709–722 DOI: 10.1021/jacs.1c03984 IF 16.383 (2021)

NAKONIECZNA A., RUTYNA P., FEDOROWICZ M., KWIATEK M., MIZAK L., ŁOBOCKA M., Three Novel Bacteriophages, J5a, F16Ba, and z1a, Specific for Bacillus anthracis, Define a New Clade of Historical Wbeta Phage Relatives. Viruses (2022) 14(2): 213 (22 p.) DOI: 10.3390/v14020213 IF 5.818 (2021)

PRZYBOROWSKI K., KURPIŃSKA A., WOJKOWSKA D., KACZARA P., SURAJ-PRAŻMOWSKA J., KAROLCZAK K., MALINOWSKA A., PELESZ A., KIJ A., KALVINS I., WATAŁA C., CHŁOPICKI S., Protein disulfide isomerase-A1 regulates intraplatelet reactive oxygen species-thromboxane A₂-dependent pathway in human platelets. Journal of Thrombosis and Haemostasis (2022) 20(1): 157-169 DOI: 10.1111/jth.15539 IF 16.036 (2021)

POTAPOWICZ J., SZOPIŃSKA M., SZUMIŃSKA D., BIALIK R.J., POLKOWSKA Ż., Sources and composition of chemical pollution in Maritime Antarctica (King George Island), part 1: Sediment and water analysis for PAH sources evaluation in the vicinity of Arctowski station. Chemosphere (2022) 288 (part 3): 132637 (9 p.) DOI: 10.1016/j.chemosphere.2021.132637 IF 8.943 (2021)

RUCIŃSKA A., ŚWIERSZCZ S., NOBIS M., ZUBEK SZ., BOCZKOWSKA M., OLSZAK M., KOSIŃSKI J.G., NOWAK S., NOWAK A., Is it possible to understand a book missing a quarter of the letters? Unveiling the belowground species richness of grasslands. Agriculture, Ecosystems & Environment (2022) 324: 107683 (12 p.) DOI: 10.1016/j.agee.2021.107683 IF 6.576 (2021)

DUBIŃSKA-MAGIERA M., LEWANDOWSKI D., CYSEWSKI D., PAWLAK S., NAJBAR B., DACZEWSKA M., Lipid droplets in skeletal muscle during grass snake (Natrix natrix L.) development. Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids (2022) 1867(2): 159086 (18 p.) DOI: 10.1016/j.bbalip.2021.159086 IF 5.228 (2021)

KRATA N., FORONCEWICZ B., ZAGOŻDŻON R., MOSZCZUK B., ZIELENKIEWICZ M., PĄCZEK L., MUCHA K., Peroxiredoxins as Markers of Oxidative Stress in IgA Nephropathy, Membranous Nephropathy and Lupus Nephritis. Archivum Immunologiae et Therapiae Experimentalis (2022) 70(1): 3 (14 p.) DOI: 10.1007/s00005-021-00638-1 IF 3.831 (2021)

DMOWSKI M., JĘDRYCHOWSKA M., MAKIEŁA-DZBEŃSKA K., DENKIEWICZ-KRUK M., SHARMA S., CHABES A., ARAKI H., FIJAŁKOWSKA I.J., Increased contribution of DNA polymerase delta to the leading strand replication in yeast with an impaired CMG helicase complex. DNA Repair (2022) 110: 103272 (11 p.) DOI: 10.1016/j.dnarep.2022.103272 IF 4.354 (2021)

FUDALA K., BIALIK R.J., The use of drone-based aerial photogrammetry in population monitoring of Southern Giant Petrels in ASMA 1, King George Island, maritime Antarctica. Global Ecology and Conservation (2022) 33: e01990 (14 p.) DOI: 10.1016/j.gecco.2021.e01990 IF 3.969 (2021)

JANIK A., PERLIŃSKA-LENART U., GAWARECKA K., AUGUSTYNIAK J., BRATEK-GEREJ E.,BERNAT P., PIŁSYK S., SKALMOWSKA P., PALAMARCZYK G., ŚWIEŻEWSKA E., KRUSZEWSKA J.S., Synthesis of dolichols in Candida albicans is co-regulated with elongation of fatty acids. International Journal of Molecular Sciences (2022) 23(1): 409 (16 p.) DOI: 10.3390/ijms23010409 IF 6.208 (2021)

ORŁOWSKA M., MUSZEWSKA A., In silico predictions of ecological plasticity mediated by protein family expansions in early-diverging fungi. Journal of Fungi (2022) 8(1): 67 (26 p.) DOI: 10.3390/jof8010067 IF 5.724 (2021)

LECHOWSKA K., WOJTYŁA Ł., QUINET M., KUBALA S., LUTTS S., GARNCZARSKA M., Endogenous polyamines and ethylene biosynthesis in relation to germination of osmoprimed brassica napus seeds under salt stress. International Journal of Molecular Sciences (2022) 23(1): 349 (18 p.) DOI: 10.3390/ijms23010349 IF 6.208 (2021)

KOTUNIAK R., BAL W., Kinetics of Cu(II) complexation by ATCUN/NTS and related peptides: a gold mine of novel ideas for copper biology. Dalton Transactions (2022) 51(1): 14-26 DOI: 10.1039/D1DT02878B IF 4.569 (2021)

TAHMAZ I., SHAHMORADI-GHAHE S., TOPF U., Prefoldin function in cellular protein homeostasis and human diseases. Frontiers in Cell and Developmental Biology (2022) 9: 816214 (16 p.) DOI: 10.3389/fcell.2021.816214 IF 6.081 (2021)