Publikacje - Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

KLOSKA A., MALINOWSKA M., GABIG-CIMIŃSKA M., JAKÓBKIEWICZ-BANECKA J., Lipids and lipid mediators associated with the risk and pathology of ischemic stroke. International Journal of Molecular Sciences (2020) 21(10): 3618 (26 p.) DOI: 10.3390/ijms21103618 IF 5.923 (2020)

MOK B.Y., DE MORAES M.H., ZENG J., BOSCH D.E., KOTRYS A.V., RAGURAM A., HSU F., RADEY M.C., PETERSON S.B., MOOTHA V.K., MOUGOUS J.D., LIU D.R., A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing. Nature (2020) 583(7817): 631–637 DOI: 10.1038/s41586-020-2477-4 IF 49.962 (2020)

SOBOLEWSKA A., HAŁAS A., PŁACHTA M., McINTYRE J., ŚLEDZIEWSKA-GÓJSKA E., Regulation of the abundance of Y‑family polymerases in the cell cycle of budding yeast in response to DNA damage. Current Genetics (2020) 66(4): 749–763 DOI: 10.1007/s00294-020-01061-3 IF 3.886 (2020)

SOCZEWKA P., FLIS K., TRIBOUILLARD-TANVIER D., DI RAGO J.-P., SANTOS C.N., MENEZES R., KAMIŃSKA J., ŻOŁĄDEK T., Flavonoids as potential drugs for VPS13-dependent rare neurodegenerative diseases. Genes (2020) 11(7): 828 (17 p.) DOI: 10.3390/genes11070828 IF 4.096 (2020)

SU X., DAUTANT A., GODARD F., BOUHIER M., ŻOŁĄDEK T., KUCHARCZYK R., DI RAGO J.-P., TRIBOUILLARD-TANVIER D., Molecular basis of the pathogenic mechanism induced by the m.9191T>C mutation in mitochondrial ATP6 gene. International Journal of Molecular Sciences (2020) 21(14): 5083 (16 p.) DOI: 10.3390/ijms21145083 IF 5.923 (2020)

KOPACZ A., KLÓSKA D., TARGOSZ-KORECKA M., ZAPOTOCZNY B., CYSEWSKI D., PERSONNIC N., WERNER E., HAJDUK K., JÓZKOWICZ A., GROCHOT-PRZĘCZEK A., Keap1 governs ageing-induced protein aggregation in endothelial cells. Redox Biology (2020) 34: 101572 (15 p.) DOI: 10.1016/j.redox.2020.101572 IF 11.799 (2020)

JARNOT P., ZIEMSKA-LEGIĘCKA J., DOBSON L., MERSKI M., MIER P., ANDRADE-NAVARRO M.A., HANCOCK J.M., DOSZTANYI Z., PALADIN L., NECCI M., PIOVESAN D., TOSATTO S.C.E., PROMPONAS V.J., GRYNBERG M., GRUCA A., PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins. Nucleic Acids Research (2020) 48(W1): W77-W84 DOI: 10.1093/nar/gkaa339 IF 16.971 (2020)

CZARNECKA A.M., BARTNIK E., FIEDOROWICZ M., RUTKOWSKI P., Targeted therapy in melanoma and mechanisms of resistance. International Journal of Molecular Sciences (2020) 21(13): 4576 (21 p.) DOI:10.3390/ijms21134576 IF 5.923 (2020)

KAZUŃ B., MAŁACZEWSKA J., KAZUŃ K., KAMIŃSKI R., ADAMEK-URBAŃSKA D., ŻYLIŃSKA-URBAN J., Dietary administration of β-1,3/1,6-glucan and Lactobacillus plantarum improves innate immune response and increases the number of intestine immune cells in roach (Rutilus rutilus). BMC Veterinary Research (2020) 16(1): 216 (10 p.) DOI:10.1186/s12917-020-02432-1 IF 2.741 (2020)

MITACHI K., YUN H.G., GILLMAN C.D., SKORUPIŃSKA-TUDEK K., ŚWIEŻEWSKA E., CLEMONS W.M., KUROSU M., Substrate tolerance of bacterial glycosyltransferase MurG: novel fluorescence-based assays. ACS Infectious Diseases (2020) 6(6): 1501-1516 DOI:10.1021/acsinfecdis.9b00242 IF 5.084 (2020)

OLIVEIRA H., PINTO G., MENDES B., DIAS O., HENDRIX H., AKTURK E., NOBEN J.P., GAWOR J., ŁOBOCKA M., LAVIGNE R., AZEREDO J., A tailspike with Exopolysaccharide depolymerase activity from a new Providencia stuartii phage makes multidrug-resistant bacteria susceptible to serum-mediated killing. Applied and Environmental Microbiology (2020) 86(13): e00073-20 DOI: 10.1128/AEM.00073-20 IF 4.792 (2020)

GREBIENIOW A., KORCZAK-ABSHIRE M., GASEK A., GÓRECKA-BRUZDA A., Antarctic fur seal (Arctocephalus gazella) annual migration and temporal patterns of on‑shore occurrence of leucistic individuals on King George Island. Polar Biology (2020) 43(7): 929-935 DOI: 10.1007/s00300-020-02694-3 IF 2.310 (2020)

PANDA P., KOVACS L., DZHINDZHEV N., FATALSKA A., PERSICO V., GEYMONAT M., RIPARBELLI M., CALLAINI G., GLOVER D.M., Tissue specific requirement of Drosophila Rcd4 for centriole duplication and ciliogenesis. Journal of Cell Biology (2020) 219(8): e201912154 DOI: 10.1083/jcb.201912154 IF 10.539 (2020)

NESTOROWICZ K., BOGACZ A., BUKOWSKA A., CHRAPLAK M., CZERWIŃSKI J., GÓRALSKI M., GRONKOWSKI M., JOPEK K., KNIŻEWSKI Ł., KOLASIŃSKI M., KOWALSKI M.L., NOWAK J., SOWIŃSKI M., WRÓBLEWSKA-KABBA S., TYMONIUK B., DUDKIEWICZ M., High-resolution allele frequencies for NGS based HLA-A, B, C, DQB1 and DRB1 typing of 23,595 bone marrow donors recruited for the Polish central potential unrelated bone marrow donor registry. Human Immunology(2020) 81(2-3): 49-51 DOI: 10.1016/j.humimm.2019.12.005 IF 2.850 (2020)

PAVLOVIC-DJURANOVIC S., ERATH J., ANDREWS R.J., BAYGUINOV P.O., CHUNG J.J., CHALKER D.L., FITZPATRICK J.AJ., MOSS W.N., SZCZĘSNY P., DJURANOVIC S., Plasmodium falciparum translational machinery condones polyadenosine repeats. eLife (2020) 9: e57799 (33 p.) DOI: 10.7554/eLife.57799 IF 8.146 (2020)

BIESZCZAD B., GARBICZ D., TRZYBIŃSKI D., DUDEK M.K., WOŹNIAK K., GRZESIUK E., MIECZKOWSKI A., Unsymmetrically-substituted 5,12-dihydrodibenzo[b,f][1,4]diazocine-6,11-dione scaffold—a useful tool for bioactive molecules design. Molecules (2020) 25(12): 2855 (24 p.) DOI: 10.3390/molecules25122855 IF 4.411 (2020)

RZEPNIKOWSKA W., KAMIŃSKA J., KABZIŃSKA D., BINIĘDA K., KOCHAŃSKI A., A yeast-based model for hereditary motor and sensory neuropathies: a simple system for complex, heterogeneous diseases. International Journal of Molecular Sciences (2020) 21(12): E4277 DOI: 10.3390/ijms21124277 IF 5.923 (2020)

RAO S.R., SKELTON L.A., WU F., ONYŚK A., SPOLNIK G., DANIKIEWICZ W., BUTLER M.C., STACKS D. A.,SURMACZ L., MU X., ŚWIEŻEWSKA E., PITTLER S.J., FLIESLER S.J., Retinal degeneration caused by rod-specific DHDDS ablation occurs without concomitant inhibition of protein N-glycosylation. iScience (2020) 23(6): 101198 (18 p.) DOI: 10.1016/j.isci.2020.101198 IF 5.458 (2020)

TUDEK A., CZERWIŃSKA J., KOSICKI K., ZDŻALIK-BIELECKA D., SHAHMORADI GHAHE S., BAŻLEKOWA-KARABAN M., BORSUK E.M., SPEINA E., DNA damage, repair and the improvement of cancer therapy – A tribute to the life and research of Barbara Tudek. Mutation Research - Genetic Toxicology and Environmental Mutagenesis (2020) 852(special issue): 503160 DOI: 10.1016/j.mrgentox.2020.503160 IF 2.873 (2020)

TONG J., NEJMAN-FALEŃCZYK B., BLOCH S., WĘGRZYN A., WĘGRZYN G., DONALDSON L.W., Ea22 Proteins from Lambda and Shiga toxin-producing bacteriophages balance structural diversity with functional similarity. ACS Omega (2020) 5(21): 12236–12244 DOI: 10.1021/acsomega.0c00894 IF 3.512 (2020)

SZEWCZYK M., MALIK D., BOROWSKI Ł.S., CZARNOMSKA S.D., KOTRYS A.V., KŁOSOWSKA-KOSICKA K., NOWOTNY M., SZCZĘSNY R.J., Human REXO2 controls short mitochondrial RNAs generated by mtRNA processing and decay machinery to prevent accumulation of double-stranded RNA. Nucleic Acids Research (2020) 48(10): 5572-5590 DOI: 10.1093/nar/gkaa302 IF 16.971 (2020)

WALTER T., KLIM J., JURKOWSKI M., GAWOR J., KÖHLING I., SŁODOWNIK M., ZIELENKIEWICZ U., Plasmidome of an environmental Acinetobacter lwoffii strain originating from a former gold and arsenic mine. Plasmid (2020) 110: 102505 (17 p.) DOI: 10.1016/j.plasmid.2020.102505 IF 3.466 (2020)

TARNOWSKI L., COLLADOS-RODRIGUEZ M., BRZYWCZY J., PIECHO-KABACIK M., KRČKOVA Z., MARTINEC J., WAWRZYŃSKA A., SIRKO A., A selective autophagy cargo receptor NBR1 modulates abscisic acid signalling in Arabidopsis thaliana. Scientific Reports (2020) 10(1): 7778 DOI: 10.1038/s41598-020-64765-z IF 4.380 (2020)

STEFANIAK E., PŁONKA D., SZCZERBA P., WEZYNFELD N.E., BAL W., Copper transporters? Glutathione reactivity of products of Cu−Aβ digestion by neprilysin. Inorganic Chemistry (2020) 59(7): 4186-4190 DOI: 10.1021/acs.inorgchem.0c00427 IF 5.165 (2020)

MIER P., PALADIN L., TAMANA S., PETROSIAN S., HAJDU-SOLTÉSZ B., URBANEK A., GRUCA A., PLEWCZYŃSKI D., GRYNBERG M., BERNADÓ P., GÁSPÁRI Z., OUZOUNIS CH. A., PROMPONAS V.J., KAJAVA A.V., HANCOCK J.M., TOSATTO S.C.E., DOSZTANYI Z., ANDRADE-NAVARRO M.A., Disentangling the complexity of low complexity proteins. Briefings in Bioinformatics (2020) 21(2): 458-472 DOI:10.1093/bib/bbz007 IF 11.622 (2020)

BILSKA A., KUSIO-KOBIAŁKA M., KRAWCZYK P.S., GEWARTOWSKA O., TARKOWSKI B., KOBYŁECKI K., NOWIS D., GOŁĄB J., GRUCHOTA J., BORSUK E., DZIEMBOWSKI A., MROCZEK S., Immunoglobulin expression and the humoral immune response is regulated by the non-canonical poly(A) polymerase TENT5C. Nature Communications (2020) 11(1): 2032 DOI: 10.1038/s41467-020-15835-3 IF 14.919 (2020)

WEZYNFELD N.E., FRĄCZYK T., BONNA A., BAL W., Peptide bond cleavage in the presence of Ni-containing particles. Metallomics (2020) 12(5): 649-653 DOI: 10.1039/d0mt00070a IF 4.526 (2020)

TARDILLO-SUÁREZ V., KAREPINA E., CHEVALLET M., GALLET B., COTTET-ROUSSELLE C., CHARBONNIER P., MORISCOT CH., MICHAUD-SORET I., BAL W., FUCHS A., TOCOULOU R., JOUNEAU P-H., VERONESI G., DENIAUD A., Nuclear translocation of silver ions and hepatocyte nuclear receptor impairment upon exposure to silver nanoparticles. Environmental Science-Nano (2020) 7(5): 1373-1387 DOI: 10.1039/c9en01348b IF 8.131 (2020)

SKORUPSKA A., BYSTRANOWSKA D., DĄBROWSKA K., OŻYHAR A., Calcium ions modulate the structure of the intrinsically disordered Nucleobindin-2 protein. International Journal of Biological Macromolecules (2020) 154: 1091-1104 DOI: 10.1016/j.ijbiomac.2020.03.110 IF 6.953 (2020)

KASPEROWICZ S., MARZEC E., MACIEJEWSKA A., TRZYBIŃSKI D., BRETNER M., WOŹNIAK K., POZNAŃSKI J., MIECZKOWSKA K., A competition between hydrophobic and electrostatic interactions in protein-ligand systems. Binding of heterogeneously halogenated benzotriazoles by the catalytic subunit of human protein kinase CK2. IUBMB Life (2020) 72(6): 1211-1219 DOI: 10.1002/iub.2271 IF 3.885 (2020)

ŚWIĄTEK M., JANCEWICZ I., KLUEBSOONGNOEN J., ZUB R., MAASSEN A., KUBALA S., UDOMKIT A., SIEDLECKI J.A., SARNOWSKI T.J., SARNOWSKA E., Various forms of HIF-1 alpha protein characterize the clear cell renal cell carcinoma cell lines. IUBMB Life(2020) 72(6): 1220-1232 DOI: 10.1002/iub.2281 IF 3.885 (2020)

MARCINKOWSKI M., PILŻYS T., GARBICZ D., STECIUK J., ZUGAJ D., MIELECKI D., SARNOWSKI T.J., GRZESIUK E., Human and Arabidopsis alpha-ketoglutarate-dependent dioxygenase homolog proteins-New players in important regulatory processes. IUBMB Life (2020) 72(6): 1126-1144 DOI: 10.1002/iub.2276 IF 3.885 (2020)

JAGIELSKA B., OZDOWSKA P., GEPNER K., KUBALA S., SIEDLECKI J.A., SARNOWSKI T.J., SARNOWSKA E., Cardiotoxicity danger in immunotherapy. IUBMB Life (2020) 72(6): 1160-1167 DOI: 10.1002/iub.2299 IF 3.885 (2020)

STACHOWIAK M., SZYMAŃSKI M., ORNOCH A., JANCEWICZ I., RUSETSKA N., CHRZAN A., DEMKOW T., SIEDLECKI J.A., SARNOWSKI T.J., SARNOWSKA E., SWI/SNF chromatin remodeling complex and glucose metabolism are deregulated in advanced bladder cancer. IUBMB Life (2020) 72(6): 1175-1188 DOI: 10.1002/iub.2254 IF 3.885 (2020)

ONYSZKIEWICZ M., GAWRYŚ-KOPCZYŃSKA M., SAŁAGAJ M., ALEKSANDROWICZ M., SAWICKA A., KOŹNIEWSKA E., SAMBOROWSKA E., UFNAL M., Valeric acid lowers arterial blood pressure in rats. European Journal of Pharmacology (2020) 877: 173086 (10 p.) DOI: 10.1016/j.ejphar.2020.173086 IF 4.432 (2020)

BUDA J., ŁOKAS E., PIETRYKA M., RICHTER D., MAGOWSKI W., IAKOVENKO N.S., PORAZIŃSKA D.L., BUDZIK T., GRABIEC M., GRZESIAK J., KLIMASZYK P., GACA P., ZAWIERUCHA K., Biotope and biocenosis of cryoconite hole ecosystems on Ecology Glacier in the maritime Antarctic. Science of the Total Environment (2020) 724: 138112 (12 p.) DOI: 10.1016/j.scitotenv.2020.138112 IF 7.963 (2020)

KOŁAKOWSKI D., KAMIŃSKA J., ŻOŁĄDEK T., The binding of the APT1 domains to phosphoinositides is regulated by metal ions in vitro. BBA - Biomembranes (2020) 1862(9): 183349 (12 p.) DOI: 10.1016/j.bbamem.2020.183349 IF 3.747 (2020)

MARZEC E., POZNAŃSKI J., PAPROCKI D., Thermodynamic contribution of iodine atom to the binding of heterogeneously polyhalogenated benzotriazoles by the catalytic subunit of human protein kinase CK2. IUBMB Life(2020) 72(6): 1203– 1210 DOI: 10.1002/iub.2257 IF 3.885 (2020)

MARZEC E., ŚWITALSKA M., WINIEWSKA-SZAJEWSKA M., WÓJCIK J., WIETRZYK J., MACIEJEWSKA A.M., POZNAŃSKI J., MIECZKOWSKI A., The halogenation of natural flavonoids, baicalein and chrysin, enhances their affinity to human protein kinase CK2. IUBMB Life (2020) 72(6): 1250-1261 DOI: 10.1002/iub.2298 IF 3.885 (2020)

BAŁABAN J., WIERZBICKI M., ZIELIŃSKA M., SZCZEPANIAK J., SOSNOWSKA M., DANILUK K., CYSEWSKI D., KOCZOŃ P., CHWALIBOG A., SAWOSZ E., Effects of graphene oxide nanofilm and chicken embryo muscle extract on muscle progenitor cell differentiation and contraction. Molecules (2020) 25(8): 1991 (21 p.) DOI: 10.3390/molecules25081991 IF 4.411 (2020)

BOCHEŃSKA K., GABIG-CIMIŃSKA M., Unbalanced Sphingolipid metabolism and its implications for the pathogenesis of psoriasis. Molecules (2020) 25(5): 1130 (19 p.) DOI: 10.3390/molecules25051130 IF 4.411 (2020)

KALENIK B.M., GÓRA-SOCHACKA A., STACHYRA A., OLSZEWSKA-TOMCZYK M., FOGTMAN A., SAWICKA R., ŚMIETANKA K., SIRKO A., Response to a DNA vaccine against the H5N1 virus depending on the chicken line and number of doses. Virology Journal (2020) 17(1): 66 (10 p.) DOI:10.1186/s12985-020-01335-9 IF 4.099 (2020)